Karimata, Hisae Tateishi: search on Z-Library

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1

Facilitation of RNA Enzyme Activity in the Molecular Crowding Media of Cosolutes

Nakano, Shu-ichi, Karimata, Hisae Tateishi, Kitagawa, Yuichi, Sugimoto, Naoki

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 1.73 MB

english, 2009

2

Chemical biology of non-canonical structures of nucleic acids for therapeutic applications

Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Chemical Communications

Year:

2020

File:

PDF, 4.05 MB

2020

3

Drastic stability change of X-X mismatch in d(CXG) trinucleotide repeat disorders under molecular crowding condition

Teng, Ye, Pramanik, Smritimoy, Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Sugimoto, Naoki

Journal:

Biochemical and Biophysical Research Communications

Year:

2018

Language:

english

File:

PDF, 3.44 MB

english, 2018

4

New Insights into Transcription Fidelity: Thermal Stability of Non-Canonical Structures in Template DNA Regulates Transcriptional Arrest, Pause, and Slippage

Tateishi-Karimata, Hisae, Isono, Noburu, Sugimoto, Naoki, Schönbach, Christian

Journal:

Year:

2014

Language:

english

File:

PDF, 931 KB

english, 2014

5

Hydration of Watson−Crick Base Pairs and Dehydration of Hoogsteen Base Pairs Inducing Structural Polymorphism under Molecular Crowding Conditions

Miyoshi, Daisuke, Nakamura, Kaori, Tateishi-Karimata, Hisae, Ohmichi, Tatsuo, Sugimoto, Naoki

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 998 KB

english, 2009

6

Effect of molecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops

Matsumoto, Saki, Tateishi-Karimata, Hisae, Takahashi, Shuntaro, Ohyama, Tatsuya, Sugimoto, Naoki

Journal:

Year:

2020

File:

PDF, 621 KB

2020

7

Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition

Banerjee, Dipanwita, Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Ghosh, Saptarshi, Endoh, Tamaki, Takahashi, Shuntaro, Sugimoto, Naoki

Journal:

Nucleic Acids Research

Year:

2020

File:

PDF, 702 KB

2020

8

G-Quadruplexes with Tetra(ethylene glycol)-Modified Deoxythymidines are Resistant to Nucleases and Inhibit HIV-1 Reverse Transcriptase

Tateishi-Karimata, Hisae, Muraoka, Takahiro, Kinbara, Kazushi, Sugimoto, Naoki

Journal:

Year:

2016

Language:

english

File:

PDF, 979 KB

english, 2016

9

Mirror-image Dependence: Targeting Enantiomeric G-quadruplex DNA by 10 Pairs of Triplex Metallohelices

Qu, Xiaogang, Zhao, Chuanqi, Song, Hualong, Scott, Peter, Zhao, Andong, Ren, Jinsong, Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Angewandte Chemie

Year:

2018

Language:

english

File:

PDF, 1.28 MB

english, 2018

10

C-rich sequence in a non-template DNA strand regulates structure change of G-quadruplex in a template strand during transcription

Teng, Ye, Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Bulletin of the Chemical Society of Japan

Year:

2018

Language:

english

File:

PDF, 519 KB

english, 2018

11

A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid

Dr. Hisae Tateishi-Karimata, Prof. Dr. Naoki Sugimoto

Journal:

Angewandte Chemie International Edition

Year:

2012

Language:

english

File:

PDF, 629 KB

english, 2012

12

Structural foundation for DNA behavior in hydrated ionic liquid: An NMR study

Marušič, Maja, Tateishi-Karimata, Hisae, Sugimoto, Naoki, Plavec, Janez

Journal:

Year:

2015

Language:

english

File:

PDF, 1.94 MB

english, 2015

13

Cover Picture: G-Quadruplexes with Tetra(ethylene glycol)-Modified Deoxythymidines are Resistant to Nucleases and Inhibit HIV-1 Reverse Transcriptase (ChemBioChem 15/2016)

Tateishi-Karimata, Hisae, Muraoka, Takahiro, Kinbara, Kazushi, Sugimoto, Naoki

Journal:

Year:

2016

File:

PDF, 390 KB

2016

14

Rücktitelbild: A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid (Angew. Chem. 6/2012)

Dr. Hisae Tateishi-Karimata, Prof. Dr. Naoki Sugimoto

Journal:

Angewandte Chemie

Year:

2012

File:

PDF, 1.01 MB

2012

15

Conformation and the sodium ion condensation on DNA and RNA structures in the presence of a neutral cosolute as a mimic of the intracellular media

Nakano, Shu-ichi, Wu, Lei, Oka, Hirohito, Karimata, Hisae Tateishi, Kirihata, Toshimasa, Sato, Yuichi, Fujii, Satoshi, Sakai, Hiroshi, Kuwahara, Masayuki, Sawai, Hiroaki, Sugimoto, Naoki

Journal:

Molecular BioSystems

Year:

2008

Language:

english

File:

PDF, 1.62 MB

english, 2008

16

i-Motifs are more stable than G-quadruplexes in a hydrated ionic liquid

Tateishi-Karimata, Hisae, Nakano, Miki, Pramanik, Smritimoy, Tanaka, Shigenori, Sugimoto, Naoki

Journal:

Chemical Communications

Year:

2015

Language:

english

File:

PDF, 2.41 MB

english, 2015

17

Expansion of the DNA 'Alphabet' beyond Natural DNA Recognition

Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Year:

2016

Language:

english

File:

PDF, 1.57 MB

english, 2016

18

Destabilization of DNA G-quadruplexes by chemical environment changes during tumor progression facilitates transcription

Tateishi-Karimata, Hisae, Kawauchi, Keiko, Sugimoto, Naoki

Journal:

Journal of the American Chemical Society

Year:

2017

Language:

english

File:

PDF, 4.66 MB

english, 2017

19

An anionic phthalocyanine decreases NRAS expression by breaking down its RNA G-quadruplex

Kawauchi, Keiko, Sugimoto, Wataru, Yasui, Takatoshi, Murata, Kohei, Itoh, Katsuhiko, Takagi, Kazuki, Tsuruoka, Takaaki, Akamatsu, Kensuke, Tateishi-Karimata, Hisae, Sugimoto, Naoki, Miyoshi, Daisuke

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.97 MB

english, 2018

20

Newly characterized interaction stabilizes DNA structure: oligoethylene glycols stabilize G-quadruplexes CH–π interactions

Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Muraoka, Takahiro, Podbevsek, Peter, Wawro, Adam M., Tanaka, Shigenori, Nakano, Shu-ichi, Kinbara, Kazushi, Plavec, Janez, Sugimoto, Naoki

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 5.17 MB

english, 2017

21

Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides

KovaÄiÄ, Matic, PodbevÅ¡ek, Peter, Tateishi-Karimata, Hisae, Takahashi, Shuntaro, Sugimoto, Naoki, Plavec, Janez

Journal:

Nucleic Acids Research

Year:

2020

Language:

english

File:

PDF, 3.93 MB

english, 2020

22

Methyl Substitution Regulates the Enantioselectivity of Supramolecular Complex Binding to Human Telomeric G-Quadruplex DNA

Xu, Bailu, Zhao, Chuanqi, Chen, Yong, Tateishi-Karimata, Hisae, Ren, Jinsong, Sugimoto, Naoki, Qu, Xiaogang

Journal:

Chemistry - A European Journal

Year:

2014

Language:

english

File:

PDF, 1.12 MB

english, 2014

23

Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids

Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Biophysical Reviews

Year:

2018

Language:

english

File:

PDF, 1.37 MB

english, 2018

24

New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures

Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Muraoka, Takahiro, Tanaka, Shigenori, Kinbara, Kazushi, Sugimoto, Naoki

Journal:

Year:

2020

File:

PDF, 2.75 MB

2020

25

[Journal of the Physical Society of Japan Proceedings of Computational Science Workshop 2014 (CSW2014) - Tsukuba, Japan (August 20-22, 2014)] Proceedings of Computational Science Workshop 2014 (CSW2014) - Choline Ions Stabilize AâT Base Pairs by Fitting into Minor Groove

Nakano, Miki, Tateishi-Karimata, Hisae, Tanaka, Shigenori, Sugimoto, Naoki

File:

PDF, 579 KB

26

3P119 Analysis for the effect of choline ions on the stability of DNA base pairs using molecular dynamics simulation(05A. Nucleic acid: Structure & Property,Poster)

Nakano, Miki, Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 727 KB

english, 2013

27

Back Cover: A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid (Angew. Chem. Int. Ed. 6/2012)

Dr. Hisae Tateishi-Karimata, Prof. Dr. Naoki Sugimoto

Journal:

Angewandte Chemie International Edition

Year:

2012

File:

PDF, 1.02 MB

2012

28

Incorporation of O 6 -methylguanine restricts the conformational conversion of the human telomere G-quadruplex under molecular crowding conditions

Zhao, Andong, Zhao, Chuanqi, Tateishi-Karimata, Hisae, Ren, Jinsong, Sugimoto, Naoki, Qu, Xiaogang

Journal:

Chemical Communications

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

29

Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations

Trajkovski, Marko, Endoh, Tamaki, Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Tanaka, Shigenori, Plavec, Janez, Sugimoto, Naoki

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 3.89 MB

english, 2018

30

Sequence and Solvent Effects on Telomeric DNA Bimolecular G-Quadruplex Folding Kinetics

Marchand, Adrien, Ferreira, Rubén, Tateishi-Karimata, Hisae, Miyoshi, Daisuke, Sugimoto, Naoki, Gabelica, Valérie

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 2.16 MB

english, 2013

31

Affinity of Molecular Ions for DNA Structures Is Determined by Solvent-Accessible Surface Area

Nakano, Miki, Tateishi-Karimata, Hisae, Tanaka, Shigenori, Sugimoto, Naoki

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 4.03 MB

english, 2014

32

Inside Back Cover: Dangling Ends Perturb the Stability of RNA Duplexes Responsive to Surrounding Conditions (ChemMedChem 9/2014)

Tateishi-Karimata, Hisae, Pramanik, Smritimoy, Nakano, Shu-ichi, Miyoshi, Daisuke, Sugimoto, Naoki

Journal:

Year:

2014

File:

PDF, 2.04 MB

2014

33

Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers

Pica, Andrea, Russo Krauss, Irene, Parente, Valeria, Tateishi-Karimata, Hisae, Nagatoishi, Satoru, Tsumoto, Kouhei, Sugimoto, Naoki, Sica, Filomena

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.14 MB

english, 2017

34

Choline Ion Interactions with DNA Atoms Explain Unique Stabilization of A–T Base Pairs in DNA Duplexes: A Microscopic View

Nakano, Miki, Tateishi-Karimata, Hisae, Tanaka, Shigenori, Sugimoto, Naoki

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 3.41 MB

english, 2014

35

A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid

Dr. Hisae Tateishi-Karimata, Prof. Dr. Naoki Sugimoto

Journal:

Angewandte Chemie

Year:

2012

Language:

english

File:

PDF, 622 KB

english, 2012

36

Dangling Ends Perturb the Stability of RNA Duplexes Responsive to Surrounding Conditions

Tateishi-Karimata, Hisae, Pramanik, Smritimoy, Nakano, Shu-ichi, Miyoshi, Daisuke, Sugimoto, Naoki

Journal:

Year:

2014

Language:

english

File:

PDF, 629 KB

english, 2014

37

Validation of the nearest-neighbor model for Watson–Crick self-complementary DNA duplexes in molecular crowding condition

Ghosh, Saptarshi, Takahashi, Shuntaro, Endoh, Tamaki, Tateishi-Karimata, Hisae, Hazra, Soumitra, Sugimoto, Naoki

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 828 KB

english, 2019

38

Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions

Teng, Ye, Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Sugimoto, Naoki

Journal:

Year:

2020

File:

PDF, 2.70 MB

2020

39

Comparable Stability of Hoogsteen and Watson–Crick Base Pairs in Ionic Liquid Choline Dihydrogen Phosphate

Tateishi-Karimata, Hisae, Nakano, Miki, Sugimoto, Naoki

Journal:

Scientific Reports

Year:

2014

Language:

english

File:

PDF, 689 KB

english, 2014

40

DNA sensor's selectivity enhancement and protection from contaminating nucleases due to a hydrated ionic liquid

Tateishi-Karimata, Hisae, Pramanik, Smritimoy, Sugimoto, Naoki

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2015

Language:

english

File:

PDF, 1.52 MB

english, 2015

41

Reevaluation of the stability of G-quadruplex structures under crowding conditions

Zhou, Jun, Tateishi-Karimata, Hisae, Mergny, Jean-Louis, Cheng, Mingpan, Feng, Zhaochi, Miyoshi, Daisuke, Sugimoto, Naoki, Li, Can

Journal:

Year:

2016

Language:

english

File:

PDF, 606 KB

english, 2016

42

Mirror-image Dependence: Targeting Enantiomeric G-quadruplex DNA by 10 Pairs of Triplex Metallohelices

Qu, Xiaogang, Zhao, Chuanqi, Song, Hualong, Scott, Peter, Zhao, Andong, Ren, Jinsong, Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Angewandte Chemie International Edition

Year:

2018

Language:

english

File:

PDF, 1.28 MB

english, 2018

43

Real-time monitoring of DNA hybridization kinetics on living cell surfaces

Rode, Ambadas B., Endoh, Tamaki, Tateishi-Karimata, Hisae, Takahashi, Shuntaro, Sugimoto, Naoki

Journal:

Chemical Communications

Year:

2013

Language:

english

File:

PDF, 1.24 MB

english, 2013

44

Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA

Tateishi-Karimata, Hisae, Banerjee, Dipanwita, Ohyama, Tatsuya, Matsumoto, Saki, Miyoshi, Daisuke, Nakano, Shu-ich, Sugimoto, Naoki

Journal:

Biochemical and Biophysical Research Communications

Year:

2020

File:

PDF, 1.55 MB

2020

45

A Turn-On Detection of DNA Sequences by Means of Fluorescence of DNA-Templated Silver Nanoclusters via Unique Interactions of a Hydrated Ionic Liquid

Teng, Ye, Tateishi-Karimata, Hisae, Tsuruoka, Takaaki, Sugimoto, Naoki

Journal:

Year:

2018

Language:

english

File:

PDF, 2.50 MB

english, 2018

46

Study on effects of molecular crowding on G-quadruplex-ligand binding and ligand-mediated telomerase inhibition

Yaku, Hidenobu, Murashima, Takashi, Tateishi-Karimata, Hisae, Nakano, Shu-ichi, Miyoshi, Daisuke, Sugimoto, Naoki

Journal:

Year:

2013

Language:

english

File:

PDF, 1.01 MB

english, 2013

47

Alkylating Probes for G-Quadruplex Structure and Evaluation of the Properties of the Alkylated G-Quadruplex DNA

Sato, Norihiro, Takahashi, Shuntaro, Tateishi-Karimata, Hisae, Hazemi, Madoka Eurika, Chikuni, Tomoko, Onizuka, Kazumitsu, Sugimoto, Naoki, Nagatsugi, Fumi

Journal:

Organic & Biomolecular Chemistry

Year:

2018

Language:

english

File:

PDF, 770 KB

english, 2018

48

Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions

Ghosh, Saptarshi, Takahashi, Shuntaro, Ohyama, Tatsuya, Endoh, Tamaki, Tateishi-Karimata, Hisae, Sugimoto, Naoki

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 933 KB

2020

49

Hydration Changes upon DNA Folding Studied by Osmotic Stress Experiments

Nakano, Shu-ichi, Yamaguchi, Daisuke, Tateishi-Karimata, Hisae, Miyoshi, Daisuke, Sugimoto, Naoki

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 624 KB

english, 2012

50

Local thermodynamics of the water molecules around single- and double-stranded DNA studied by grid inhomogeneous solvation theory

Nakano, Miki, Tateishi-Karimata, Hisae, Tanaka, Shigenori, Tama, Florence, Miyashita, Osamu, Nakano, Shu-ichi, Sugimoto, Naoki

Journal:

Chemical Physics Letters

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

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